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java.lang.Objectorg.jmol.modelset.Polymer
org.jmol.modelsetbio.BioPolymer
org.jmol.modelsetbio.PhosphorusPolymer
class PhosphorusPolymer
Field Summary |
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Fields inherited from class org.jmol.modelsetbio.BioPolymer |
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bsSelectedMonomers, hasWingPoints, haveParameters, invalidControl, monomers, sheetSmoothing |
Fields inherited from class org.jmol.modelset.Polymer |
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bioPolymerIndexInModel, controlPoints, leadAtomIndices, leadMidpoints, leadPoints, model, monomerCount, type, TYPE_AMINO, TYPE_CARBOHYDRATE, TYPE_NOBONDING, TYPE_NUCLEIC, wingVectors |
Constructor Summary | |
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PhosphorusPolymer(Monomer[] monomers)
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Method Summary | |
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void |
getPdbData(Viewer viewer,
char ctype,
char qtype,
int mStep,
int derivType,
java.util.BitSet bsAtoms,
java.util.BitSet bsSelected,
boolean bothEnds,
boolean isDraw,
boolean addHeader,
LabelToken[] tokens,
OutputStringBuffer pdbATOM,
java.lang.StringBuffer pdbCONECT,
java.util.BitSet bsWritten)
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Methods inherited from class org.jmol.modelset.Polymer |
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addSecondaryStructure, calcRasmolHydrogenBonds, calculateStructures, calculateStruts, getType, setStructureList |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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PhosphorusPolymer(Monomer[] monomers)
Method Detail |
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public void getPdbData(Viewer viewer, char ctype, char qtype, int mStep, int derivType, java.util.BitSet bsAtoms, java.util.BitSet bsSelected, boolean bothEnds, boolean isDraw, boolean addHeader, LabelToken[] tokens, OutputStringBuffer pdbATOM, java.lang.StringBuffer pdbCONECT, java.util.BitSet bsWritten)
getPdbData
in class Polymer
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