All Classes

AboutDialog ActionManager ActionManagerMT AdfReader AimsReader AlchemyReader AlphaMonomer AlphaPolymer AlphaPolymer.Code AminoMonomer AminoPolymer AmpacReader AnimationManager ApbsReader ApiPlatform AppConsole AppletConsole AppletWrapper ArrayListTransferHandler ArrayUtil ASimpleJvxlWriter Atom Atom AtomCollection AtomData AtomDataReader AtomDataServer AtomIndexIterator AtomIteratorWithinModel AtomIteratorWithinModelSet AtomPropertyMapper AtomSetChooser AtomSetChooser.AtomSet AtomSetCollection AtomSetCollectionReader AtomShape AviCreator Axes AxesRenderer Backbone BackboneRenderer Balls BallsRenderer BannerFrame Base64 BasisFunctionReader Bbcage BbcageRenderer BinaryDcdReader BinaryDocument BinaryReader Binding BioPolymer BioShape BioShapeCollection BioShapeRenderer BitSetUtil Bond Bond Bond.BondSet BondCollection BondIterator BondIteratorSelected BoxInfo Bspf Bspt CageRenderer Calculation Calculations CalculationsUFF CarbohydrateMonomer CarbohydratePolymer Cartoon CartoonRenderer CastepDensityReader CastepReader Chain ChimePanel ChimeToJmol ChimeToJmol.ApplicationCloser CifDataReader CifReader Circle3D ClassPreloader Colix3D ColorEncoder ColorManager CommandHistory CompoundDocument ConsoleTextArea Contact ContactPair ContactRenderer ContextToken CrystalReader CsfReader CubeIterator CubeReader CubeReader Cylinder3D DataManager DCT DefaultLogger DgridReader Dialog Dialog.TypeFilter Dimension Dipole Dipoles DipolesRenderer Display DisplayPanel DmolReader Dots DotsRenderer DragBinding Draw Draw.EnumDrawType DrawMesh DrawRenderer Dsn6BinaryReader Echo EchoRenderer EfvetReader Eigen Element Elements Ellipsoids Ellipsoids.Ellipsoid EllipsoidsRenderer EnterListener EnumAnimationMode EnumAxesMode EnumCallback EnumHBondType EnumPalette EnumQuantumShell EnumStereoMode EnumStructure EnumVdw EnvelopeCalculation Escape EspressoReader Event Export3D FastBitSet FFParam FileChooser FileManager FileManager.EnumFileStatus FilePreview FilePreview.FPPanel FileReader FileTyper FoldingXyzReader Font Font3D FontLineShape FontLineShapeRenderer FontShape ForceField ForceFieldReader ForceFieldUFF Frank FrankRenderer GamessReader GamessUKReader GamessUSReader GaussianDialog GaussianReader GaussianWfnReader GenNBOReader Geodesic GeoSurface GeoSurfaceRenderer GetKey GhemicalMMReader GifEncoder GifEncoder.AdaptiveColorCollection GifEncoder.ColorItem GifEncoder.ColorVector GifEncoder.ColorVector.CountComparator Graphics3D GromacsReader Group GT GT.Language GuiMap GulpReader HallInfo Halos HalosRenderer HBond Helix HelpDialog Hermite3D HistoryFile Hover HoverRenderer Huffman HyperChemReader Image ImageCreator ImageEncoder ImageSelection Int2IntHash Int2IntHash.Entry Interface InvalidSmilesException IsoFxyReader IsoFxyzReader IsoIntersectReader IsoMepReader IsoMlpReader IsoMOReader IsoPlaneReader IsoShapeReader IsoSolventReader Isosurface IsosurfaceMesh IsosurfaceRenderer JaguarReader JaguarReader JmeReader Jmol Jmol JmolAdapter JmolApp JmolAppConsoleInterface JmolAppletInterface JmolAppletRegistry JmolBinding JmolBioResolver JmolCallbackListener JmolConsole JmolConstants JmolData JmolDialogInterface JmolEdge JmolEdge.EnumBondOrder JmolFileDropper JmolFilesReaderInterface JmolFrame JmolGestureServerInterface JmolImageCreatorInterface JmolInstance JmolJniClientAdapter JmolLineReader JmolMeasurementClient JmolModelKitInterface JmolMolecule JmolMovieCreatorInterface JmolMultiTouchAdapter JmolMultiTouchClient JmolMultiTouchClientAdapter JmolNode JmolPanel JmolPanel.ActionChangedListener JmolPdfCreatorInterface JmolPopup JmolPopupInterface JmolPrompt JmolPromptInterface JmolRendererInterface JmolResourceHandler JmolScriptEditorInterface JmolSelectionListener JmolSimpleViewer JmolSparshClientAdapter JmolStatusListener JmolTouchSimulatorInterface JmolViewer JpegEncoder JpegInfo JsonNioClient JsonNioService Jvxl JvxlCoder JvxlData JvxlReader JvxlWrite JvxlXmlReader KeyJCheckBox KeyJCheckBoxMenuItem KeyJMenu KeyJMenuItem KeyJRadioButtonMenuItem KfDocument KinemageReader KioskFrame Labels LabelsRenderer LabelToken LcaoCartoon LcaoCartoonRenderer Leaf LimitedLineReader LimitedLineReader Line3D Logger LoggerInterface LogPanel LoopedStreams MainPopupResourceBundle MapFileReader MarchingCubes MarchingSquares MarchingSquares.ContourVertex MdCrdReader MdTopReader Measure Measurement MeasurementData MeasurementPending MeasurementTable Measures MeasuresRenderer MepCalculation MepCalculationInterface Mesh MeshCollection MeshData MeshData MeshData.Data MeshDataServer MeshRenderer MeshRibbon MeshRibbonRenderer MeshSurface MinAtom MinBond Minimizer MinimizerInterface MlpCalculation MOCalculation Model ModelCollection ModelCollection.StateScript ModelKit ModelKitPopup ModelKitPopupResourceBundle ModelLoader ModelManager ModelSet Mol2Reader Mol3DReader MoldenReader MolecularOrbital MolecularOrbitalRenderer Molecules MolReader MonitorInputStream Monomer MopacGraphfReader MopacReader MopacSlaterReader MOReader Mouse MPJmolApp MrcBinaryReader MsmsReader NciCalculation Node Normix3D NucleicMonomer NucleicPolymer NWChemReader Object2d Object2dShape ObjReader OdysseyReader Orbitals OutputStringBuffer P2nReader ParallelProcessor ParallelProcessor.Process Parameters Parser PdbReader PdfCreator PfaatBinding PhosphorusMonomer PhosphorusPolymer Platform Platform3D Plot3D Plot3DRenderer PltFormattedReader Pmesh PmeshReader PmeshRenderer PngEncoder Point3fi PointGroup PolygonFileReader Polyhedra PolyhedraRenderer Polymer PopInJmol PopupResource PovrayDialog PpmEncoder PqrReader PreferencesDialog PropertyManager ProteinStructure PsiReader QchemReader Quadric QuantumCalculation QuantumCalculationInterface QuantumPlaneCalculationInterface Quaternion RadiusData RadiusData.EnumType RasmolBinding RecentFilesDialog Rectangle RepaintManager Resolver Resolver Rgb16 Ribbons RibbonsRenderer Rockets RocketsRenderer Rotation ScriptButtons ScriptCompilationTokenParser ScriptCompiler ScriptContext ScriptEditor ScriptEvaluator ScriptFlowContext ScriptFunction ScriptManager ScriptMathProcessor ScriptVariable SelectionManager Shade3D Shape ShapeManager ShapeRenderer Sheet ShelxReader SiestaReader SimpleMarchingCubes SimpleMarchingCubesOld SimplePopup SimpleUnitCell SinglePointGesture SlaterData SlaterReader Slice SlowBitSet SmarterJmolAdapter SmilesAromatic SmilesAtom SmilesBond SmilesGenerator SmilesMatcher SmilesMatcherInterface SmilesMeasure SmilesParser SmilesSearch SmilesSearch.VTemp SpaceGroup SpartanArchive SpartanInputReader SpartanReader SpartanSmolReader Sphere3D Splash SplashInterface Stars StarsRenderer StateManager StateManager.Connection StaticConstants StatusBar StatusListener StatusManager Sticks SticksRenderer Strands StrandsRenderer Structure SurfaceFileReader SurfaceFileTyper SurfaceGenerator SurfaceReader SurfaceStatus SurfaceTool SurfaceToolGUI Symmetry SymmetryInfo SymmetryInterface SymmetryOperation TempArray Test Text Text3D TextFormat TextShape TickerThread TickInfo Token Trace TraceRenderer TransformManager TransformManager10 TransformManager11 Translation Triangle3D TriangleData Turn TwoPointGesture Uccage UccageRenderer UnitCell UseTable Util VaspOutcarReader Vectors VectorsRenderer VertexDataServer Viewer VolumeData VolumeDataInterface VolumeDataReader VolumeFileReader VoxelDataCreator WebExport WebMOReader WebPanel WhatsNewDialog Widgets Wien2kReader WrappedApplet WrappedAppletLoader XmlArgusReader XmlChem3dReader XmlCmlReader XmlMolproReader XmlOdysseyReader XmlQEReader XmlReader XmlReader XmlReader.DummyResolver XmlUtil XmlVaspReader XmlXsdReader XplorReader XyzReader ZipUtil ___Exporter __CartesianExporter __RayTracerExporter _IdtfExporter _MayaExporter _ObjExporter _PovrayExporter _TachyonExporter _VrmlExporter _X3dExporter