org.jmol.modelsetbio
Class Helix

java.lang.Object
  extended by org.jmol.modelsetbio.ProteinStructure
      extended by org.jmol.modelsetbio.Helix

public class Helix
extends ProteinStructure


Field Summary
 
Fields inherited from class org.jmol.modelsetbio.ProteinStructure
apolymer, axisA, axisB, axisUnitVector, globalSerialID, monomerCount, monomerIndexFirst, monomerIndexLast, segments, serialID, strandCount, structureID, subtype, type, uniqueID, vectorProjection
 
Constructor Summary
Helix(AlphaPolymer apolymer, int monomerIndex, int monomerCount, int id, EnumStructure subtype)
           
 
Method Summary
 void calcAxis()
           
 
Methods inherited from class org.jmol.modelsetbio.ProteinStructure
addMonomer, calcSegments, getAxisEndPoint, getAxisStartPoint, getIndex, getInfo, getMonomerCount, getMonomerIndex, getSegments, getStructureMidPoint, isWithin, lowerNeighborIsHelixOrSheet, removeMonomer, resetAxes, upperNeighborIsHelixOrSheet
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

Helix

Helix(AlphaPolymer apolymer,
      int monomerIndex,
      int monomerCount,
      int id,
      EnumStructure subtype)
Method Detail

calcAxis

public void calcAxis()
Overrides:
calcAxis in class ProteinStructure