Class GenbankProxySequenceReader<C extends Compound>

    • Constructor Detail

      • GenbankProxySequenceReader

        public GenbankProxySequenceReader​(java.lang.String genbankDirectoryCache,
                                          java.lang.String accessionID,
                                          CompoundSet<C> compoundSet)
                                   throws java.io.IOException,
                                          java.lang.InterruptedException,
                                          CompoundNotFoundException
        Throws:
        java.lang.InterruptedException
        java.io.IOException
        CompoundNotFoundException
    • Method Detail

      • getGenbankDirectoryCache

        public java.lang.String getGenbankDirectoryCache()
        Local directory cache of Genbank that can be downloaded
        Returns:
        the uniprotDirectoryCache
      • setGenbankDirectoryCache

        public void setGenbankDirectoryCache​(java.lang.String genbankDirectoryCache)
        Parameters:
        genbankDirectoryCache -
      • getHeader

        public java.lang.String getHeader()
      • main

        public static void main​(java.lang.String[] args)
                         throws java.lang.Throwable
        Throws:
        java.lang.Throwable