OpenMS  2.5.0
OpenSwathFeatureXMLToTSV

Converts a featureXML to a mProphet tsv

potential predecessor tools $ \longrightarrow $ OpenSwathFeatureXMLToTSV $ \longrightarrow $ potential successor tools
OpenSwathAnalyzer Downstream data analysis
OpenSwathConfidenceScoring

Creates a tsv that is compatible as input to mProphet. Furthermore it creates the columns "decoy" and "transition_group_id" which are required by mProphet.

The command line parameters of this tool are:

The algorithm parameters for the Analyzer filter are: