skbio.diversity.
get_beta_diversity_metrics
()[source]¶List scikit-bio’s beta diversity metrics
State: Experimental as of 0.4.1.
The beta diversity metrics listed here can be passed as metrics to
skbio.diversity.beta_diversity
.
Alphabetically sorted list of beta diversity metrics implemented in scikit-bio.
list of str
See also
beta_diversity()
, get_alpha_diversity_metrics()
, scipy.spatial.distance.pdist()
Notes
SciPy implements many additional beta diversity metrics that are not
included in this list. See documentation for
scipy.spatial.distance.pdist
for more details.